Stem-loop bcy-MIR529

Accession

MI0016989

Description

Bruguiera cylindrica bcy-MIR529 precursor miRNA

Gene family

MIPF0001312; MIR529_2

Sequence

guguuuaucacuuuuccuucuucugggcuuucuaagagaaguuuuucuuguuggguuuuauuuuuguuuauugagcuuggggagggcguuugauucuuguuucuuuuuuagauggguacagagauagaagaaguauugaaGAAGAAGAGAGAUGGUAGAGgc
((.((((((((((((.(((((((...((((((((((((((....))))).)))).((((((((((((..(((.(.((.((((((((((.........)).)))))))).)).).))))))))))))))))))))...)))))))..))))).))))))).))

Structure

  g       -     -c       ugg     cuaagagaaguuuuucuuguuggg            uu   g g  u        -  uuu 
gu uuuauca cuuuu  cuucuuc   gcuuu                        uuuuauuuuugu  auu a cu ggggaggg cg   g
|| ||||||| |||||  |||||||   |||||                        ||||||||||||  ||| | || |||||||| ||   a
cg AGAUGGU GAGAG  GAAGaag   ugaag                        aagauagagaca  ugg u ga uuuuucuu gu   u
  G       A     AA       uua     ------------------------            --   g a  u        u  ucu 

Annotation confidence Not enough data

Genome context

Unknown

Mature bcy-miR529

• Accession: MIMAT0020967
• Description: Bruguiera cylindrica bcy-miR529 mature miRNA
• Sequence: 141 - GAAGAAGAGAGAUGGUAGAG - 160
• Evidence: experimental ; Northern [1], RTPCR [1]

References

1. Identification of microRNA precursors in Bruguiera spp.
   "Lee WS, Li LP, Ling HC, Harikrishna JA"
   Botanica Marina. (2011) 54:313-324