miRBase entry: pma-mir-7a-2

Stem-loop pma-mir-7a-2


Accession
MI0017004
Description
Petromyzon marinus pma-mir-7a-2 precursor miRNA
Gene family
MIPF0000022; mir-7


Sequence

cuggucugcugccaggUGGAAGACUAGUGAUUUUGUUGUugaaauaugaaaaugagCAACAAGUCACAGUCUCCCGUCUagcacagacuuc
..((((((.(((.((((((.(((((.(((((((.((((((..............)))))))))))))))))).)))))).)))))))))..

Structure
cu      c   c      A     A       U      gaaaua 
  ggucug ugc aggUGG AGACU GUGAUUU GUUGUu      u
  |||||| ||| |||||| ||||| ||||||| ||||||       
  ucagac acg UCUGCC UCUGA CACUGAA CAACga      g
cu      -   a      C     -       -      guaaaa 


Annotation confidence Not enough data
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Genome context
GL501321.1: 468603-468693 [+]

Database links

Mature pma-miR-7a-5p

Accession MIMAT0019370
Description Petromyzon marinus pma-miR-7a-5p mature miRNA
Sequence 17 - UGGAAGACUAGUGAUUUUGUUGU - 39
Evidence experimental
454 [1]

Mature pma-miR-7a-3p

Accession MIMAT0019371
Description Petromyzon marinus pma-miR-7a-3p mature miRNA
Sequence 57 - CAACAAGUCACAGUCUCCCGUCU - 79
Evidence experimental
454 [1]

References

  1. PubMed ID: 20959416
    microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
    "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
    "Proc Natl Acad Sci U S A (2010) 107:19379-19383