miRBase entry: pma-mir-9a-2

Stem-loop pma-mir-9a-2


Accession
MI0017007
Description
Petromyzon marinus pma-mir-9a-2 precursor miRNA
Gene family
MIPF0000014; mir-9


Sequence

uucuaguaggugguaUCUUUGGUUAUCUAGCUGUAUGagugugucuggccgucaUAAAGCUAGAUAACCGAAAGUAccaacgacuucca
....(((...((((((.(((((((((((((((.(((((..((.....))..))))).))))))))))))))).))))))...)))....

Structure
uucu   agg      C               G     gu  g 
    agu   ugguaU UUUGGUUAUCUAGCU UAUGa  gu u
    |||   |||||| ||||||||||||||| |||||  || c
    uca   accAUG AAGCCAAUAGAUCGA AUacu  cg u
accu   gca      A               A     gc  g 


Annotation confidence Not enough data
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Genome context
GL492128.1: 47-135 [+]

Database links

Mature pma-miR-9a-5p

Accession MIMAT0019373
Description Petromyzon marinus pma-miR-9a-5p mature miRNA
Sequence 16 - UCUUUGGUUAUCUAGCUGUAUG - 37
Evidence experimental
454 [1]

Mature pma-miR-9a-3p

Accession MIMAT0019374
Description Petromyzon marinus pma-miR-9a-3p mature miRNA
Sequence 55 - UAAAGCUAGAUAACCGAAAGUA - 76
Evidence experimental
454 [1]

References

  1. PubMed ID: 20959416
    microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
    "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
    "Proc Natl Acad Sci U S A (2010) 107:19379-19383