miRBase entry: pma-mir-26a-2

Stem-loop pma-mir-26a-2


Accession
MI0017031
Description
Petromyzon marinus pma-mir-26a-2 precursor miRNA
Gene family
MIPF0000043; mir-26


Sequence

cuuuaggcugacacccugUUCAAGUAAUCCAGGAUAGGCUguguuacucgugggCCUUUCCUCGGUUGCUUGAUCCggguguagucugcaa
...(((((((.(((((.(.((((((((((.((((.(((((.((.....))..))))).)))).)))))))))).).))))))))))))...

Structure
cuu       a     u U          C    U     -g  u 
   uaggcug caccc g UCAAGUAAUC AGGA AGGCU  ug u
   ||||||| ||||| | |||||||||| |||| |||||  || a
   gucugau guggg C AGUUCGUUGG UCCU UCCgg  gc c
aac       -     C U          C    U     gu  u 


Annotation confidence Not enough data
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Genome context
GL477073.1: 186582-186672 [+]

Database links

Mature pma-miR-26a-5p

Accession MIMAT0019408
Description Petromyzon marinus pma-miR-26a-5p mature miRNA
Sequence 19 - UUCAAGUAAUCCAGGAUAGGCU - 40
Evidence experimental
454 [1]

Mature pma-miR-26a-2-3p

Accession MIMAT0019410
Description Petromyzon marinus pma-miR-26a-2-3p mature miRNA
Sequence 55 - CCUUUCCUCGGUUGCUUGAUCC - 76
Evidence experimental
454 [1]

References

  1. PubMed ID: 20959416
    microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
    "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
    "Proc Natl Acad Sci U S A (2010) 107:19379-19383