Stem-loop pma-mir-130e

Accession

MI0017064

Description

Petromyzon marinus pma-mir-130e precursor miRNA

Gene family

MIPF0000034; mir-130

Sequence

ucugcaguccggcaccuuuucaaguuugcacuccuauggcgcuccguaugaagCAGUGCAAUAUUGAAAAAGGGUAcgggacugcggg
.(((((((((.(.((((((((((..(((((((.((((((....))))....)).)))))))..))))))..)))).).))))))))).

Structure

u         g c    --      gu       c  ----    c 
 cugcagucc g accu  uuucaa  uugcacu cu    augg g
 ||||||||| | ||||  ||||||  ||||||| ||    ||||  
 ggcgucagg c UGGG  AAAGUU  AACGUGA ga    ugcc c
g         g A    AA      AU       C  agua    u 

Annotation confidence Not enough data

Genome context

Unknown

Mature pma-miR-130e

• Accession: MIMAT0019453
• Description: Petromyzon marinus pma-miR-130e mature miRNA
• Sequence: 54 - CAGUGCAAUAUUGAAAAAGGGUA - 76
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383