miRBase entry: pma-mir-138b

Stem-loop pma-mir-138b


Accession
MI0017076
Description
Petromyzon marinus pma-mir-138b precursor miRNA
Gene family
MIPF0000075; mir-138


Sequence

uggugccgugccgcAGCUGGUGUUGUGAAUCAGGCUGauccucuccugcuccuccgccgcuucacagcaccggcacggcacggcc
....(((((((((..((((((((((((((...(((.((....(....)....)).)))..)))))))))))))).))))))))).

Structure
uggu         cA              UCA   U  uccu u 
    gccgugccg  GCUGGUGUUGUGAA   GGC Ga    c c
    |||||||||  ||||||||||||||   ||| ||    |  
    cggcacggc  cggccacgacacuu   ccg cu    g c
---c         -a              -cg   c  ccuc u 


Annotation confidence Not enough data
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Genome context
GL477603.1: 148354-148438 [+]

Database links

Mature pma-miR-138b

Accession MIMAT0019470
Description Petromyzon marinus pma-miR-138b mature miRNA
Sequence 15 - AGCUGGUGUUGUGAAUCAGGCUG - 37
Evidence experimental
454 [1]

References

  1. PubMed ID: 20959416
    microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
    "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
    "Proc Natl Acad Sci U S A (2010) 107:19379-19383