miRBase entry: pma-mir-152b

Stem-loop pma-mir-152b


Accession
MI0017084
Description
Petromyzon marinus pma-mir-152b precursor miRNA
Gene family
MIPF0000056; mir-148


Sequence

ccaggcuuucgagccgaaguucugugauacacuugggcugugcugucaaggaagUCAGUGCAAAACAGAACUUUGguuggagagccgcg
...(((((((.((((((((((((((....((((..((((.(.((....)).)))))))))....)))))))))))))).)))))))...

Structure
cca       g              gaua    ug    g g  g 
   ggcuuuc agccgaaguucugu    cacu  ggcu u cu u
   ||||||| ||||||||||||||    ||||  |||| | ||  
   ccgagag uugGUUUCAAGACA    GUGA  CUga a ga c
gcg       g              AAAC    --    - g  a 


Annotation confidence Not enough data
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Genome context
GL479147.1: 18075-18163 [+]

Database links

Mature pma-miR-152b

Accession MIMAT0019482
Description Petromyzon marinus pma-miR-152b mature miRNA
Sequence 55 - UCAGUGCAAAACAGAACUUUG - 75
Evidence experimental
454 [1]

References

  1. PubMed ID: 20959416
    microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
    "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
    "Proc Natl Acad Sci U S A (2010) 107:19379-19383