miRBase entry: pma-mir-181a

Stem-loop pma-mir-181a


Accession
MI0017089
Description
Petromyzon marinus pma-mir-181a precursor miRNA
Gene family
MIPF0000007; mir-181


Sequence

ucucgaugAACAUUCAACGCUGUCGGUGAGUuuuguucuucccgaccuuaaACCAUCGACCGUUGACUGUACCucgcca
...(((.(.(((.((((((..(((((((.((((.(((......)))...))))))))))))))))).))).).)))...

Structure
ucu   u A   U      CU       A    --u   cu 
   cga g ACA UCAACG  GUCGGUG GUuu   guu  u
   ||| | ||| ||||||  ||||||| ||||   |||   
   gcu C UGU AGUUGC  CAGCUAC CAaa   cag  c
acc   C A   C      --       -    uuc   cc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature pma-miR-181a-5p

Accession MIMAT0019486
Description Petromyzon marinus pma-miR-181a-5p mature miRNA
Sequence 9 - AACAUUCAACGCUGUCGGUGAGU - 31
Evidence experimental
454 [1]

Mature pma-miR-181a-3p

Accession MIMAT0019487
Description Petromyzon marinus pma-miR-181a-3p mature miRNA
Sequence 52 - ACCAUCGACCGUUGACUGUACC - 73
Evidence experimental
454 [1]

References

  1. PubMed ID: 20959416
    microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
    "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
    "Proc Natl Acad Sci U S A (2010) 107:19379-19383