miRBase entry: pma-mir-181b-1

Stem-loop pma-mir-181b-1


Accession
MI0017090
Description
Petromyzon marinus pma-mir-181b-1 precursor miRNA


Sequence

gcaggaucucgcuuGACAUUCAGUGCUGUCGGUGGGUguugcgcgugccugccucgaacacauaacCCAGGGAGCACUGAAUGCACAccgugauccgag
...(((((.((..((.(((((((((((.(((((..(((((..((......))....)))))...)))..)).)))))))))))))...)).)))))...

Structure
gca     u  -cu  A           G  --   -GG     --gc  gu 
   ggauc cg   uG CAUUCAGUGCU UC  GGU   GUguu    gc  g
   ||||| ||   || ||||||||||| ||  |||   |||||    ||   
   ccuag gc   AC GUAAGUCACGA GG  Cca   cacaa    cg  c
gag     u  cAC  -           G  AC   aua     gcuc  uc 


Annotation confidence Not enough data
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Genome context
GL477358.1: 3082-3180 [+]

Database links

Mature pma-miR-181b-5p

Accession MIMAT0019488
Description Petromyzon marinus pma-miR-181b-5p mature miRNA
Sequence 15 - GACAUUCAGUGCUGUCGGUGGGU - 37
Evidence experimental
454 [1]

Mature pma-miR-181b-3p

Accession MIMAT0019489
Description Petromyzon marinus pma-miR-181b-3p mature miRNA
Sequence 67 - CCAGGGAGCACUGAAUGCACA - 87
Evidence experimental
454 [1]

References

  1. PubMed ID: 20959416
    microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
    "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
    "Proc Natl Acad Sci U S A (2010) 107:19379-19383