miRBase entry: pma-mir-203a

Stem-loop pma-mir-203a


Accession
MI0017104
Description
Petromyzon marinus pma-mir-203a precursor miRNA
Gene family
MIPF0000108; mir-203


Sequence

ucugcuucccgggcccAGUGGUUCUCAUCAGUUCAACAguucuuuggagaaauuGUGAAAUGUUUAGGACCACUGGgaccggaggggccuc
...(((((((((.((((((((((((...((.((((.(((((((....)).))))))))).))...)))))))))))).)))).)))))...

Structure
ucu     -    g            CAU  G    A     -  u 
   gcuuc ccgg cccAGUGGUUCU   CA UUCA CAguu cu u
   ||||| |||| ||||||||||||   || |||| ||||| ||  
   cgggg ggcc gGGUCACCAGGA   GU AAGU Guuaa ga g
cuc     a    a            UUU  A    -     a  g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature pma-miR-203a-5p

Accession MIMAT0019511
Description Petromyzon marinus pma-miR-203a-5p mature miRNA
Sequence 17 - AGUGGUUCUCAUCAGUUCAACA - 38
Evidence experimental
454 [1]

Mature pma-miR-203a-3p

Accession MIMAT0019512
Description Petromyzon marinus pma-miR-203a-3p mature miRNA
Sequence 55 - GUGAAAUGUUUAGGACCACUGG - 76
Evidence experimental
454 [1]

References

  1. PubMed ID: 20959416
    microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
    "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
    "Proc Natl Acad Sci U S A (2010) 107:19379-19383