miRBase entry: pma-mir-208

Stem-loop pma-mir-208


Accession
MI0017109
Description
Petromyzon marinus pma-mir-208 precursor miRNA


Sequence

gaaguggcgcacgggcGUGCUCCUCGCUCGUUUUAUUUuggaaucaaaaguuaaagAUAAGACGAGCAAGUAGUGGGUccgagcgccgcacg
...(((((((.(((((.((((.((.((((((((((((((..............)))))))))))))).)).)))).))))).)))))))...

Structure
gaa       a     G    C  C              ggaauc 
   guggcgc cgggc UGCU CU GCUCGUUUUAUUUu      a
   ||||||| ||||| |||| || ||||||||||||||       
   cgccgcg gccUG GUGA GA CGAGCAGAAUAgaa      a
gca       a     G    U  A              auugaa 


Annotation confidence Not enough data
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Genome context
GL478284.1: 33837-33928 [+]

Database links

Mature pma-miR-208-5p

Accession MIMAT0019520
Description Petromyzon marinus pma-miR-208-5p mature miRNA
Sequence 17 - GUGCUCCUCGCUCGUUUUAUUU - 38
Evidence experimental
454 [1]

Mature pma-miR-208-3p

Accession MIMAT0019521
Description Petromyzon marinus pma-miR-208-3p mature miRNA
Sequence 57 - AUAAGACGAGCAAGUAGUGGGU - 78
Evidence experimental
454 [1]

References

  1. PubMed ID: 20959416
    microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
    "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
    "Proc Natl Acad Sci U S A (2010) 107:19379-19383