miRBase entry: pma-mir-551

Stem-loop pma-mir-551


Accession
MI0017139
Description
Petromyzon marinus pma-mir-551 precursor miRNA
Gene family
MIPF0000360; mir-551


Sequence

augccuccgaaaucaaguguggguaugaccuuguuguuuuaauccuagGCGACCCAUACUUGGUUUCAAAggacu
...(((..((((((((((((((((.((.(((...............)))))))))))))))))))))..)))...

Structure
aug   cc                a  a   uguugu 
   ccu  gaaaucaagugugggu ug ccu      u
   |||  |||||||||||||||| || |||      u
   ggA  CUUUGGUUCAUACCCA GC Gga      u
uca   AA                -  -   uccuaa 


Annotation confidence Not enough data
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Genome context
GL476399.1: 721621-721695 [+]

Database links

Mature pma-miR-551

Accession MIMAT0019558
Description Petromyzon marinus pma-miR-551 mature miRNA
Sequence 49 - GCGACCCAUACUUGGUUUCAAA - 70
Evidence experimental
454 [1]

References

  1. PubMed ID: 20959416
    microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
    "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
    "Proc Natl Acad Sci U S A (2010) 107:19379-19383