miRBase entry: pma-mir-875

Stem-loop pma-mir-875


Accession
MI0017140
Description
Petromyzon marinus pma-mir-875 precursor miRNA


Sequence

gucugccugagacAAUACCUCAGAAUUGUCAGGGUGcucagcaauccgcaccugacagugcugggguuuagucucagcagac
((((((.((((((...(((((((.(((((((((.(((..........)))))))))))).)))))))...))))))))))))

Structure
      c      AAU       A         G   ucag 
gucugc ugagac   ACCUCAG AUUGUCAGG UGc    c
|||||| ||||||   ||||||| ||||||||| |||     
cagacg acucug   ugggguc ugacagucc acg    a
      -      auu       g         -   ccua 


Annotation confidence Not enough data
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Genome context
GL476481.1: 178382-178463 [+]

Database links

Mature pma-miR-875

Accession MIMAT0019559
Description Petromyzon marinus pma-miR-875 mature miRNA
Sequence 14 - AAUACCUCAGAAUUGUCAGGGUG - 36
Evidence experimental
454 [1]

References

  1. PubMed ID: 20959416
    microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
    "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
    "Proc Natl Acad Sci U S A (2010) 107:19379-19383