miRBase entry: pma-mir-4557

Stem-loop pma-mir-4557


Accession
MI0017167
Description
Petromyzon marinus pma-mir-4557 precursor miRNA


Sequence

gcgucgucucucuguagAAAUGCUUCCAGUGACUGUGUCuggaaaagcccucgcauugccacguuugcuggaagcaagucuauauggagaugggag
...((((((((.((((((..((((((((((((.((((...(.((..((....)).)).))))).))))))))))))..)))))).))))))))...

Structure
gcg        c      AA            C    UCu g  aa  c 
   ucgucucu uguagA  UGCUUCCAGUGA UGUG   g aa  gc c
   |||||||| ||||||  |||||||||||| ||||   | ||  ||  
   gguagagg auaucu  acgaaggucguu gcac   c uu  cg u
gag        u      ga            u    --- g  -a  c 


Annotation confidence Not enough data
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Genome context
GL479154.1: 395632-395727 [+]

Database links

Mature pma-miR-4557

Accession MIMAT0019589
Description Petromyzon marinus pma-miR-4557 mature miRNA
Sequence 18 - AAAUGCUUCCAGUGACUGUGUC - 39
Evidence experimental
454 [1]

References

  1. PubMed ID: 20959416
    microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
    "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
    "Proc Natl Acad Sci U S A (2010) 107:19379-19383