miRBase entry: pma-mir-4566

Stem-loop pma-mir-4566


Accession
MI0017176
Description
Petromyzon marinus pma-mir-4566 precursor miRNA


Sequence

ugccgugcgauuUGUGCAGUGUGCAACGUUUGCUcgagcuaaacgcaaguacugugcauccccugugcgcugucaguuuguccacggug
.((((((.(((...(((((((((((..(..(((.((.(((.......)))..)).)))..)..))))))))).))....))))))))).

Structure
u      c   -uUG  -         AC UU   U  -a   aa 
 gccgug gau    UG CAGUGUGCA  G  UGC cg  gcu  a
 |||||| |||    || |||||||||  |  ||| ||  |||  c
 uggcac cug    ac gucgcgugu  c  acg gu  uga  g
g      -   uuug  u         cc cu   u  ca   ac 


Annotation confidence Not enough data
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Genome context
GL477852.1: 8288-8376 [+]

Database links

Mature pma-miR-4566

Accession MIMAT0019598
Description Petromyzon marinus pma-miR-4566 mature miRNA
Sequence 13 - UGUGCAGUGUGCAACGUUUGCU - 34
Evidence experimental
454 [1]

References

  1. PubMed ID: 20959416
    microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
    "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
    "Proc Natl Acad Sci U S A (2010) 107:19379-19383