miRBase entry: pma-mir-4574

Stem-loop pma-mir-4574


Accession
MI0017184
Description
Petromyzon marinus pma-mir-4574 precursor miRNA


Sequence

guucagauGCUGAGAUACACAGUUCGCAGUucauagaagucugccuguugguacgcuguugaacugaguaucucgacaucugccc
...((((((.((((((((.(((((((((((...........((((....)))).)))).))))))).)))))))).))))))...

Structure
guu      C        A       -    ucauagaaguc    u 
   cagauG UGAGAUAC CAGUUCG CAGU           ugcc g
   |||||| |||||||| ||||||| ||||           ||||  
   gucuac gcucuaug gucaagu gucg           augg u
ccc      a        a       u    ----------c    u 


Annotation confidence Not enough data
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Genome context
GL477899.1: 8221-8305 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from pma-mir-4574
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pma-miR-4574

Accession MIMAT0019607
Description Petromyzon marinus pma-miR-4574 mature miRNA
Sequence 9 - GCUGAGAUACACAGUUCGCAGU - 30
Evidence experimental
454 [1]

References

  1. PubMed ID: 20959416
    microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
    "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
    "Proc Natl Acad Sci U S A (2010) 107:19379-19383