miRBase entry: pma-mir-4578

Stem-loop pma-mir-4578


Accession
MI0017188
Description
Petromyzon marinus pma-mir-4578 precursor miRNA


Sequence

uggcggcgguggcgccuguugagcgacgcucgcucgacggccgcgugaguuguuuuguuuuGCGGUUGCCCUCGCACGACGGACGuuuccgcugcgcu
..(((((((.((((.((((((.((((.((((((..((((((.((....)).))..))))..))))..))..)))).)))))).)))).)))))))...

Structure
-ug       u    c      a    -c  --    uc    --  c  g 
   gcggcgg ggcg cuguug gcga  gc  ucgc  gacg  gc gc u
   ||||||| |||| |||||| ||||  ||  ||||  ||||  || ||  
   cgucgcc uuGC GGCAGC CGCU  CG  GGCG  uugu  ug ug g
ucg       u    A      A    CC  UU    uu    uu  u  a 


Annotation confidence Not enough data
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Genome context
GL478614.1: 34784-34881 [-]

Database links

Mature pma-miR-4578

Accession MIMAT0019611
Description Petromyzon marinus pma-miR-4578 mature miRNA
Sequence 62 - GCGGUUGCCCUCGCACGACGGACG - 85
Evidence experimental
454 [1]

References

  1. PubMed ID: 20959416
    microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
    "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
    "Proc Natl Acad Sci U S A (2010) 107:19379-19383