miRBase entry: pma-mir-4582

Stem-loop pma-mir-4582


Accession
MI0017192
Description
Petromyzon marinus pma-mir-4582 precursor miRNA


Sequence

caaucccccgugucUCUCGUGUCCUCCUGUGUCUACGgguauaaguuggaagagacacagggagacacagagacacugguagacac
......((.((((((((.(((((.((((((((((.(...((.....))...))))))))))).))))))))))))).)).......

Structure
-caaucc  c        C     C          A Ggg  u 
       cc gugucUCU GUGUC UCCUGUGUCU C   ua a
       || |||||||| ||||| |||||||||| |   || a
       gg cacagaga cacag gggacacaga g   gu g
cacagau  u        -     a          - aag  u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature pma-miR-4582

Accession MIMAT0019615
Description Petromyzon marinus pma-miR-4582 mature miRNA
Sequence 15 - UCUCGUGUCCUCCUGUGUCUACG - 37
Evidence experimental
454 [1]

References

  1. PubMed ID: 20959416
    microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
    "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
    "Proc Natl Acad Sci U S A (2010) 107:19379-19383