miRBase entry: pma-mir-4597

Stem-loop pma-mir-4597


Accession
MI0017207
Description
Petromyzon marinus pma-mir-4597 precursor miRNA


Sequence

caaaugagaaacacagcgagacgcgugugcaacgacgcgauuaccgaugcgugucUCGCCGUGUUAUUUGCGUCUCGcuguguugucugcgucuc
...((((((((((((((((((((((.(((..(((..((((.(((......)))..)))))))..))).)))))))))))))))).))).)))...

Structure
caa   -   -                u   ca   ac    -u   cg 
   aug aga aacacagcgagacgcg gug  acg  gcga  uac  a
   ||| ||| |||||||||||||||| |||  |||  ||||  |||   
   ugc ucu uugugucGCUCUGCGU UAU  UGC  CGCU  gug  u
cuc   g   g                U   UG   --    cu   cg 


Annotation confidence Not enough data
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Genome context
GL481093.1: 5777-5871 [-]

Database links

Mature pma-miR-4597

Accession MIMAT0019630
Description Petromyzon marinus pma-miR-4597 mature miRNA
Sequence 56 - UCGCCGUGUUAUUUGCGUCUCG - 77
Evidence experimental
454 [1]

References

  1. PubMed ID: 20959416
    microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
    "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
    "Proc Natl Acad Sci U S A (2010) 107:19379-19383