miRBase entry: pma-mir-4619

Stem-loop pma-mir-4619


Accession
MI0017230
Description
Petromyzon marinus pma-mir-4619 precursor miRNA


Sequence

augcgcugugcuacgugaCACCCCCUCGCCGAUUGGCUACGUgacaaacccccucgccgauuggccacuugucggguggugcuggugguggcagcggu
...(((((((((((..(.(((((((..((((((((((..................))))))))))........))).)))))..))))).))))))..

Structure
aug      -     gu a    -   ------UC          UACGUgac 
   cgcugu gcuac  g CACC CCC        GCCGAUUGGC        a
   |||||| |||||  | |||| |||        ||||||||||         
   gcgacg uggug  c gugg ggg        cgguuagccg        a
-ug      g     gu -    u   cuguucac          cuccccca 


Annotation confidence Not enough data
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Genome context
GL481737.1: 13511-13608 [+]

Database links

Mature pma-miR-4619

Accession MIMAT0019653
Description Petromyzon marinus pma-miR-4619 mature miRNA
Sequence 19 - CACCCCCUCGCCGAUUGGCUACGU - 42
Evidence experimental
454 [1]

References

  1. PubMed ID: 20959416
    microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
    "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
    "Proc Natl Acad Sci U S A (2010) 107:19379-19383