miRBase entry: pma-mir-4630

Stem-loop pma-mir-4630


Accession
MI0017241
Description
Petromyzon marinus pma-mir-4630 precursor miRNA


Sequence

aaaccucacacccaucaucauuaacaccgccuaucgccacacaguguacauuuuugcGAUAAGACGGUGUUAAUGGUGAUaggcgugaggugu
..(((((((.((.(((((((((((((((((.(((((((((...))).........)))))).).)))))))))))))))).)).)))))))..

Structure
aa       a  c                - c      ---------   a 
  accucac cc aucaucauuaacaccg c uaucgc         cac  
  ||||||| || |||||||||||||||| | ||||||         ||| c
  uggagug gg UAGUGGUAAUUGUGGC G AUAGcg         gug  
ug       c  a                A A      uuuuuacau   a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature pma-miR-4630

Accession MIMAT0019664
Description Petromyzon marinus pma-miR-4630 mature miRNA
Sequence 58 - GAUAAGACGGUGUUAAUGGUGAU - 80
Evidence experimental
454 [1]

References

  1. PubMed ID: 20959416
    microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
    "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
    "Proc Natl Acad Sci U S A (2010) 107:19379-19383