Stem-loop sequence osa-MIR3980b

Accession MI0017253
Description Oryza sativa miR3980b stem-loop
Gene family MIPF0001268; MIR3980
Stem-loop 
                 uuca  -                    a      ggcgccuuccccuugagcucgggagacgcguucugcuuuggcuggg 
gcggcgucuuccucuuc    cc uuaggagaaucgacggccuc gucagg                                              g
|||||||||||||||||    || |||||||||||||||||||| ||||||                                              g
cgccgcagaaggagaag    gg gauccucuuagcugccggag cggucc                                              c
                 ----  c                    c      ugcuucacagacugaggccacuacuacucccgggcggccucggacg
Get sequence
Deep sequencing
1103 reads, 2 experiments

Mature sequence osa-miR3980b-5p

Accession MIMAT0019677
Sequence

31 -  

aaucgacggccucagucaggg

 - 51

Get sequence
Deep sequencing 830 reads, 2 experiments
Evidence experimental; Solexa [1]

Mature sequence osa-miR3980b-3p

Accession MIMAT0019678
Sequence

147 -  

cuggccgaggccgucgauucu

 - 167

Get sequence
Deep sequencing 210 reads, 2 experiments
Evidence experimental; Solexa [1]

References

1
PMID:21113019 "Identification and analysis of seven H(2)O(2)-responsive miRNAs and 32 new miRNAs in the seedlings of rice (Oryza sativa L. ssp. indica)" Li T, Li H, Zhang YX, Liu JY Nucleic Acids Res. 39:2821-2833(2011).