Stem-loop sequence osa-MIR812n

Accession MI0017254
Description Oryza sativa miR812n stem-loop
Gene family MIPF0000345; MIR812
Stem-loop 
c                g                 -     uc  c         a        u  u     uuucuauuguuauuagaugauaaaacau 
 uuaagugcagccauga uuuccgugcccaacuuu aucgu  gu uuauuugaa uuuuuuua ga uagua                            g
 |||||||||||||||| ||||||||||||||||| |||||  || ||||||||| |||||||| || |||||                             
 aauucacgucgguacu aaaggcacggguugaaa uagca  ca aauaaacuu aaaaaaau uu guuau                            a
a                a                 c     ga  c         a        u  u     uuuuguauucaguguguauuucaugaua
Get sequence
Deep sequencing
10546 reads, 3 experiments
Genome context
Coordinates (MSU7) Overlapping transcripts
Chr8: 14108082-14108284 [-]
intergenic

Mature sequence osa-miR812n-5p

Accession MIMAT0019679
Sequence

4 -  

aagugcagccaugaguuuccgugc

 - 27

Get sequence
Deep sequencing 542 reads, 3 experiments
Evidence experimental; Solexa [1]

Mature sequence osa-miR812n-3p

Accession MIMAT0019680
Sequence

179 -  

acggaaaaucauggcugcacuuaa

 - 202

Get sequence
Deep sequencing 2498 reads, 3 experiments
Evidence experimental; Solexa [1]

References

1
PMID:21113019 "Identification and analysis of seven H(2)O(2)-responsive miRNAs and 32 new miRNAs in the seedlings of rice (Oryza sativa L. ssp. indica)" Li T, Li H, Zhang YX, Liu JY Nucleic Acids Res. 39:2821-2833(2011).