Stem-loop osa-MIR2873b

Accession

MI0017257

Description

Oryza sativa osa-MIR2873b precursor miRNA

Gene family

MIPF0001679; MIR2873

Literature search

2 open access papers mention osa-MIR2873b
(2 sentences)

Sequence

97 reads, 67 reads per million, 2 experiments

uacauucccaccaaauaucaaguucaaacucaacuuuauuuaggaguaacagaaaagacauuuugggugaaugguaacaugacacuauucaccuagaauuucucuuuuuuguuucucucaaaugaagcuaaguUUGGACUUGAGAUUUGGUAUGaaugua
(((((((..(((((((.(((((((((((((...((((((((.((((.(((((((((((.((((((((((((((((........))))))))))))))))...))))))))))).)))).))))))))...))))))))))))).)))))))..)))))))

Structure

       cc       a             caa        a    u           --c                aac 
uacauuc  accaaau ucaaguucaaacu   cuuuauuu ggag aacagaaaaga   auuuugggugaauggu   a
|||||||  ||||||| |||||||||||||   |||||||| |||| |||||||||||   ||||||||||||||||    
auguaaG  UGGUUUA AGUUCAGGUUuga   gaaguaaa ucuc uuguuuuuucu   uaagauccacuuauca   u
       UA       G             auc        c    u           cuu                cag 

Annotation confidence Not enough data

Genome context

Chr2: 18974743-18974902 [+]

Mature osa-miR2873b

• Accession: MIMAT0019685
• Description: Oryza sativa osa-miR2873b mature miRNA
• Sequence: 134 - UUGGACUUGAGAUUUGGUAUG - 154
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21113019
   Identification and analysis of seven H(2)O(2)-responsive miRNAs and 32 new miRNAs in the seedlings of rice (Oryza sativa L. ssp. indica)
   "Li T, Li H, Zhang YX, Liu JY"
   "Nucleic Acids Res (2011) 39:2821-2833