Stem-loop sequence hsa-mir-4661

Accession

MI0017289 (change log)

Symbol

HGNC:MIR4661

Description

Homo sapiens miR-4661 stem-loop

Literature search

2 open access papers mention hsa-mir-4661
(2 sentences)

Stem-loop

   u        a                   ----a   a 
5'  uuacucug acuagcucuguggauccug     cag c
    |||||||| |||||||||||||||||||     ||| a
3'  aaugagac ugaucgagacaccuaggac     guc g
   a        c                   agaua   c 

Deep sequencing

259 reads, 0 reads per million, 34 experiments

Confidence

Annotation confidence: high

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr8: 91205485-91205559 [+]
• Overlapping transcripts:

  intergenic

Database links

• EntrezGene:MIR4661
• HGNC:MIR4661
• miRBase Tracker:MI0017289

Mature sequence hsa-miR-4661-5p

• Accession: MIMAT0019729
• Sequence: 10 - aacuagcucuguggauccugac - 31
• Deep sequencing: 211 reads, 29 experiments
• Evidence: experimental; Illumina [1]
• Predicted targets:
  • TargetMiner:hsa-miR-4661-5p
  • TargetScanVert:hsa-miR-4661-5p
  • miRDB:hsa-miR-4661-5p

Mature sequence hsa-miR-4661-3p

• Accession: MIMAT0019730
• Sequence: 47 - caggauccacagagcuagucca - 68
• Deep sequencing: 45 reads, 13 experiments
• Evidence: experimental; Illumina [1]
• Predicted targets:
  • TargetMiner:hsa-miR-4661-3p
  • TargetScanVert:hsa-miR-4661-3p
  • miRDB:hsa-miR-4661-3p

References

1. PMID:21199797 "Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene" Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C Cancer Res. 71:78-86(2011).