Stem-loop sequence hsa-mir-4659b

Accession

MI0017291 (change log)

Symbol

HGNC:MIR4659B

Description

Homo sapiens miR-4659b stem-loop

Gene family

MIPF0001256; mir-4659

Stem-loop

          c                          u 
5' cuguuga guugccaugucuaagaagaaaauuuu c
   ||||||| |||||||||||||||||||||||||| u
3' gacgacu cgacgguacagauucuucuuuugaaa c
          u                          c 

Deep sequencing

189 reads, 0 reads per million, 64 experiments

Confidence

Annotation confidence: high

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Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr8: 6745168-6745240 [-]
• Overlapping transcripts:

  intergenic

Clustered miRNAs

< 10kb from hsa-mir-4659b

• hsa-mir-4659b: chr8: 6745168-6745240 [-]
• hsa-mir-4659a: chr8: 6745164-6745244 [+]

Database links

• EntrezGene:MIR4659B
• HGNC:MIR4659B
• miRBase Tracker:MI0017291

Mature sequence hsa-miR-4659b-5p

• Accession: MIMAT0019733
• Sequence: 10 - uugccaugucuaagaagaa - 28
• Deep sequencing: 22 reads, 11 experiments
• Evidence: experimental; Illumina [1]
• Predicted targets:
  • TargetMiner:hsa-miR-4659b-5p
  • TargetScanVert:hsa-miR-4659b-5p
  • miRDB:hsa-miR-4659b-5p

Mature sequence hsa-miR-4659b-3p

• Accession: MIMAT0019734
• Sequence: 45 - uuucuucuuagacauggcagcu - 66
• Deep sequencing: 158 reads, 57 experiments
• Evidence: experimental; Illumina [1]
• Predicted targets:
  • TargetMiner:hsa-miR-4659b-3p
  • TargetScanVert:hsa-miR-4659b-3p
  • miRDB:hsa-miR-4659b-3p

References

1. PMID:21199797 "Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene" Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C Cancer Res. 71:78-86(2011).