Stem-loop sequence hsa-mir-4666a

Accession

MI0017296 (change log)

Previous IDs

hsa-mir-4666

Symbol

HGNC:MIR4666A

Description

Homo sapiens miR-4666a stem-loop

Literature search

1 open access papers mention hsa-mir-4666a
(1 sentences)

Stem-loop

      a                          uacaaaau 
5' auc cuuaaauacaugucagauuguaugcc        c
   ||| ||||||||||||||||||||||||||        c
3' uag gaauuuauguacagucuaacauacgg        c
      a                          ucagaccu 

Deep sequencing

21 reads, 0 reads per million, 12 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr1: 228462074-228462152 [+]
• Overlapping transcripts:

  sense

  OTTHUMT00000095986 ; OBSCN-001; 3'UTR (exon 19)

  OTTHUMT00000421354 ; OBSCN-011; 3'UTR (exon 23)

  ENST00000359599 ; OBSCN-201; 3'UTR (exon 8)

  ENST00000284548 ; OBSCN-001; 3'UTR (exon 19)

  ENST00000422127 ; OBSCN-204; 3'UTR (exon 19)

  ENST00000366707 ; OBSCN-202; 3'UTR (exon 19)

  ENST00000366709 ; OBSCN-203; 3'UTR (exon 19)

  ENST00000570156 ; OBSCN-011; 3'UTR (exon 23)

  antisense

  OTTHUMT00000467424 ; RP5-1139B12.2-001; exon 1

  ENST00000602517 ; RP5-1139B12.2-001; exon 1

Database links

• EntrezGene:MIR4666
• HGNC:MIR4666A
• miRBase Tracker:MI0017296

Mature sequence hsa-miR-4666a-5p

• Accession: MIMAT0019741
• Previous IDs: hsa-miR-4666-5p
• Sequence: 10 - auacaugucagauuguaugcc - 30
• Deep sequencing: 8 reads, 6 experiments
• Evidence: experimental; Illumina [1]
• Predicted targets:
  • TargetMiner:hsa-miR-4666a-5p
  • TargetScanVert:hsa-miR-4666a-5p
  • miRDB:hsa-miR-4666a-5p

Mature sequence hsa-miR-4666a-3p

• Accession: MIMAT0019742
• Previous IDs: hsa-miR-4666-3p
• Sequence: 52 - cauacaaucugacauguauuu - 72
• Deep sequencing: 12 reads, 7 experiments
• Evidence: experimental; Illumina [1]
• Predicted targets:
  • TargetMiner:hsa-miR-4666a-3p
  • TargetScanVert:hsa-miR-4666a-3p
  • miRDB:hsa-miR-4666a-3p

References

1. PMID:21199797 "Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene" Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C Cancer Res. 71:78-86(2011).