Stem-loop sequence hsa-mir-4691

Accession

MI0017324 (change log)

Symbol

HGNC:MIR4691

Description

Homo sapiens miR-4691 stem-loop

Literature search

1 open access papers mention hsa-mir-4691
(1 sentences)

Stem-loop

      g      cag uc   -   g  a  a    c  cccu a 
5' gga cacucc   g  cuc cag cc ug gcug gg    g u
   ||| ||||||   |  ||| ||| || || |||| ||    |  
3' ccu gugagg   c  gag guc gg ac cgac uc    c g
      -      aua gu   a   a  c  -    c  aucu u 

Deep sequencing

76 reads, 9.52 reads per million, 21 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr11: 68033897-68033981 [+]
• Overlapping transcripts:

  antisense

  OTTHUMT00000394750 ; C11orf24-001; intron 2

  OTTHUMT00000394752 ; C11orf24-002; intron 2

  OTTHUMT00000394753 ; C11orf24-007; intron 2

  OTTHUMT00000394754 ; C11orf24-006; intron 2

  ENST00000304271 ; C11orf24-001; intron 2

  ENST00000533310 ; C11orf24-002; intron 2

  ENST00000530166 ; C11orf24-007; intron 2

  ENST00000527280 ; C11orf24-006; intron 2

Clustered miRNAs

< 10kb from hsa-mir-4691

• hsa-mir-7113: chr11: 68032864-68032922 [+]
• hsa-mir-4691: chr11: 68033897-68033981 [+]

Database links

• EntrezGene:MIR4691
• HGNC:MIR4691
• RNAcentral:URS000075C981_9606
• miRBase Tracker:MI0017324

Mature sequence hsa-miR-4691-5p

• Accession: MIMAT0019781
• Sequence: 14 - guccuccaggccaugagcugcgg - 36
• Deep sequencing: 2 reads, 2 experiments
• Evidence: experimental; Illumina [1]
• Predicted targets:
  • TargetMiner:hsa-miR-4691-5p
  • TargetScanVert:hsa-miR-4691-5p
  • miRDB:hsa-miR-4691-5p

Mature sequence hsa-miR-4691-3p

• Accession: MIMAT0019782
• Sequence: 53 - ccagccacggacugagagugcau - 75
• Deep sequencing: 69 reads, 19 experiments
• Evidence: experimental; Illumina [1]
• Database links:
  • RNAcentral:URS000012F9EC_9606
• Predicted targets:
  • TargetMiner:hsa-miR-4691-3p
  • TargetScanVert:hsa-miR-4691-3p
  • miRDB:hsa-miR-4691-3p

References

1. PMID:21199797 "Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene" Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C Cancer Res. 71:78-86(2011).