Stem-loop sequence hsa-mir-4727

Accession

MI0017364 (change log)

Symbol

HGNC:MIR4727

Description

Homo sapiens miR-4727 stem-loop

Literature search

2 open access papers mention hsa-mir-4727
(5 sentences)

Stem-loop

   -               -  a    cag 
5'  aaucugccagcuucc ac gugg   a
    ||||||||||||||| || ||||   u
3'  uuagacggucgaagg ug uacc   u
   c               g  a    cuu 

Deep sequencing

126 reads, 0 reads per million, 42 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr17: 38825838-38825892 [+]
• Overlapping transcripts:

  intergenic

Database links

• EntrezGene:MIR4727
• HGNC:MIR4727
• RNAcentral:URS000075A17A_9606
• miRBase Tracker:MI0017364

Mature sequence hsa-miR-4727-5p

• Accession: MIMAT0019847
• Sequence: 2 - aucugccagcuuccacagugg - 22
• Deep sequencing: 4 reads, 4 experiments
• Evidence: experimental; Illumina [1]
• Predicted targets:
  • TargetMiner:hsa-miR-4727-5p
  • TargetScanVert:hsa-miR-4727-5p
  • miRDB:hsa-miR-4727-5p

Mature sequence hsa-miR-4727-3p

• Accession: MIMAT0019848
• Sequence: 34 - auagugggaagcuggcagauuc - 55
• Deep sequencing: 121 reads, 39 experiments
• Evidence: experimental; Illumina [1]
• Database links:
  • RNAcentral:URS000006A1CB_9606
• Predicted targets:
  • TargetMiner:hsa-miR-4727-3p
  • TargetScanVert:hsa-miR-4727-3p
  • miRDB:hsa-miR-4727-3p

References

1. PMID:21199797 "Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene" Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C Cancer Res. 71:78-86(2011).