Stem-loop sequence hsa-mir-4763

Accession

MI0017404 (change log)

Symbol

HGNC:MIR4763

Description

Homo sapiens miR-4763 stem-loop

Literature search

6 open access papers mention hsa-mir-4763
(11 sentences)

Stem-loop

         -          u     u    agcccuc    u      acu 
5' ccuguc ccuccugccc gcgcc gccc       cugc cuggug   g
   |||||| |||||||||| ||||| ||||       |||| ||||||   a
3' gggcgg ggggggcggg cgugg cggg       gacg gaccgc   g
         c          u     u    -------    -      cag 

Deep sequencing

268 reads, 5.33 reads per million, 75 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr22: 46113566-46113657 [+]
• Overlapping transcripts:

  sense

  OTTHUMT00000322280 ; ATXN10-004; intron 1

  OTTHUMT00000318142 ; ATXN10-001; intron 5

  OTTHUMT00000322278 ; ATXN10-002; intron 5

  ENST00000476998 ; ATXN10-004; intron 1

  ENST00000381061 ; ATXN10-201; intron 4

  ENST00000252934 ; ATXN10-001; intron 5

  ENST00000498009 ; ATXN10-002; intron 5

Clustered miRNAs

< 10kb from hsa-mir-4763

• hsa-let-7a-3: chr22: 46112749-46112822 [+]
• hsa-mir-4763: chr22: 46113566-46113657 [+]
• hsa-let-7b: chr22: 46113686-46113768 [+]

Database links

• EntrezGene:MIR4763
• HGNC:MIR4763
• miRBase Tracker:MI0017404

Mature sequence hsa-miR-4763-5p

• Accession: MIMAT0019912
• Sequence: 19 - cgccugcccagcccuccugcu - 39
• Deep sequencing: 40 reads, 32 experiments
• Evidence: experimental; Illumina [1]
• Predicted targets:
  • TargetMiner:hsa-miR-4763-5p
  • TargetScanVert:hsa-miR-4763-5p
  • miRDB:hsa-miR-4763-5p

Mature sequence hsa-miR-4763-3p

• Accession: MIMAT0019913
• Sequence: 59 - aggcaggggcuggugcugggcggg - 82
• Deep sequencing: 117 reads, 27 experiments
• Evidence: experimental; Illumina [1]
• Predicted targets:
  • TargetMiner:hsa-miR-4763-3p
  • TargetScanVert:hsa-miR-4763-3p
  • miRDB:hsa-miR-4763-3p

References

1. PMID:21199797 "Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene" Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C Cancer Res. 71:78-86(2011).