Stem-loop sequence hsa-mir-4774

Accession

MI0017417 (change log)

Symbol

HGNC:MIR4774

Description

Homo sapiens miR-4774 stem-loop

Gene family

MIPF0001578; mir-4774

Literature search

1 open access papers mention hsa-mir-4774
(1 sentences)

Stem-loop

   uaua     g          ag        -aa   a 
5'     uuguu ucugguaugu  uagguaau   cug c
       ||||| ||||||||||  ||||||||   ||| a
3'     aacaa agaccgugua  auccguua   gac a
   auac     a          ca        aca   a 

Deep sequencing

73 reads, 0 reads per million, 30 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr2: 168582943-168583018 [+]
• Overlapping transcripts:

  intergenic

Database links

• EntrezGene:MIR4774
• HGNC:MIR4774
• miRBase Tracker:MI0017417

Mature sequence hsa-miR-4774-5p

• Accession: MIMAT0019929
• Sequence: 11 - ucugguauguaguagguaauaa - 32
• Deep sequencing: 57 reads, 26 experiments
• Evidence: experimental; Illumina [1-2]
• Predicted targets:
  • TargetMiner:hsa-miR-4774-5p
  • TargetScanVert:hsa-miR-4774-5p
  • miRDB:hsa-miR-4774-5p

Mature sequence hsa-miR-4774-3p

• Accession: MIMAT0019930
• Sequence: 47 - auugccuaacaugugccagaa - 67
• Deep sequencing: 11 reads, 4 experiments
• Evidence: experimental; Illumina [1-2]
• Predicted targets:
  • TargetMiner:hsa-miR-4774-3p
  • TargetScanVert:hsa-miR-4774-3p
  • miRDB:hsa-miR-4774-3p

References

1. PMID:21199797 "Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene" Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C Cancer Res. 71:78-86(2011).
2. PMID:21606961 "Discovery of new microRNAs by small RNAome deep sequencing in childhood acute lymphoblastic leukemia" Schotte D, Akbari Moqadam F, Lange-Turenhout EA, Chen C, van Ijcken WF, Pieters R, den Boer ML Leukemia. 25:1389-1399(2011).