Stem-loop sequence hsa-mir-4777

Accession

MI0017421 (change log)

Symbol

HGNC:MIR4777

Description

Homo sapiens miR-4777 stem-loop

Literature search

1 open access papers mention hsa-mir-4777
(1 sentences)

Stem-loop

            u                ag    a       cu 
5' uagaauauu cggcauucuagaugag  auau uauauac  c
   ||||||||| ||||||||||||||||  |||| |||||||  a
3' aucuuauaa gucguaagaucuacuc  uaug guauaug  u
            u                ca    -       ua 

Deep sequencing

25 reads, 0 reads per million, 12 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr2: 231362708-231362793 [+]
• Overlapping transcripts:

  sense

  OTTHUMT00000332263 ; SP100-019; intron 4

  OTTHUMT00000256914 ; SP100-001; intron 18

  OTTHUMT00000332248 ; SP100-004; intron 18

  OTTHUMT00000332246 ; SP100-002; intron 18

  ENST00000492546 ; SP100-019; intron 4

  ENST00000264052 ; SP100-001; intron 18

  ENST00000409112 ; SP100-004; intron 18

  ENST00000340126 ; SP100-002; intron 18

Database links

• EntrezGene:MIR4777
• HGNC:MIR4777
• miRBase Tracker:MI0017421

Mature sequence hsa-miR-4777-5p

• Accession: MIMAT0019934
• Sequence: 16 - uucuagaugagagauauauaua - 37
• Deep sequencing: 14 reads, 5 experiments
• Evidence: experimental; Illumina [1]
• Predicted targets:
  • TargetMiner:hsa-miR-4777-5p
  • TargetScanVert:hsa-miR-4777-5p
  • miRDB:hsa-miR-4777-5p

Mature sequence hsa-miR-4777-3p

• Accession: MIMAT0019935
• Sequence: 57 - auaccucaucuagaaugcugua - 78
• Deep sequencing: 10 reads, 8 experiments
• Evidence: experimental; Illumina [1]
• Predicted targets:
  • TargetMiner:hsa-miR-4777-3p
  • TargetScanVert:hsa-miR-4777-3p
  • miRDB:hsa-miR-4777-3p

References

1. PMID:21199797 "Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene" Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C Cancer Res. 71:78-86(2011).