Stem-loop tcc-MIR156e

Accession

MI0017457

Description

Theobroma cacao tcc-MIR156e precursor miRNA

Gene family

MIPF0000008; MIR156

Sequence

aggaggaacuggugauguugUUGACAGAAGAUAGAGAGCACagaugaugagaugcauggagccugcauuucacuccuuugugcucucuauucuucugucaucaccuuucauccccucacuuaa
.(((.(((..(((((......(((((((((((((((((((((((.(((((((((((.......))))))))).)).))))))))))))).))))))))))))))).))).)))..........

Structure

---------a   g   cu     uguugU          -             u  -         ug 
          gga gaa  gguga      UGACAGAAGA UAGAGAGCACaga ga ugagaugca  g
          ||| |||  |||||      |||||||||| ||||||||||||| || |||||||||  a
          ccu cuu  ccacu      acugucuucu aucucucguguuu cu acuuuacgu  g
aauucacucc   a   -u     ------          u             c  c         cc 

Annotation confidence Not enough data

Genome context

Unknown

Mature tcc-miR156e

• Accession: MIMAT0020373
• Description: Theobroma cacao tcc-miR156e mature miRNA
• Sequence: 21 - UUGACAGAAGAUAGAGAGCAC - 41
• Evidence: not_experimental

References

1. PubMed ID: 21186351
   The genome of Theobroma cacao
   "Argout X, Salse J, Aury JM, Guiltinan MJ, Droc G, Gouzy J, Allegre M, Chaparro C, Legavre T, Maximova SN, Abrouk M, Murat F, Fouet O, Poulain J, Ruiz M, Roguet Y, Rodier-Goud M, Barbosa-Neto JF, Sabot F, Kudrna D, Ammiraju JS, Schuster SC, Carlson JE, Sal"
   "Nat Genet (2011) 43:101-108