Stem-loop tcc-MIR160c

Accession

MI0017462

Description

Theobroma cacao tcc-MIR160c precursor miRNA

Gene family

MIPF0000032; MIR160

Sequence

aaaagggucacguccugaucUGCCUGGCUCCCUGGAUGCCAacuaaggaugcugucgacaaggauuggcccuuccuaguuggcaucagaggagucaagcagguccaaaauuagacagauu
...((((.....))))(((((((.((((((((((.((((((((((.(((.((((((......)).))))...)))))))))))))))).))))))).)))))))................

Structure

aaaagggucacguccu       C       -   G          a   --u    -  ga 
                gaucUGC UGGCUCC CUG AUGCCAacua gga   gcug uc  c
                ||||||| ||||||| ||| |||||||||| |||   |||| ||   
                cuggacg acugagg gac uacgguugau ccu   cggu ag  a
uuagacagauuaaaac       a       a   -          -   ucc    u  ga 

Annotation confidence Not enough data

Genome context

Unknown

Mature tcc-miR160c

• Accession: MIMAT0020378
• Description: Theobroma cacao tcc-miR160c mature miRNA
• Sequence: 21 - UGCCUGGCUCCCUGGAUGCCA - 41
• Evidence: not_experimental

References

1. PubMed ID: 21186351
   The genome of Theobroma cacao
   "Argout X, Salse J, Aury JM, Guiltinan MJ, Droc G, Gouzy J, Allegre M, Chaparro C, Legavre T, Maximova SN, Abrouk M, Murat F, Fouet O, Poulain J, Ruiz M, Roguet Y, Rodier-Goud M, Barbosa-Neto JF, Sabot F, Kudrna D, Ammiraju JS, Schuster SC, Carlson JE, Sal"
   "Nat Genet (2011) 43:101-108