Stem-loop tcc-MIR164c

Accession

MI0017466

Description

Theobroma cacao tcc-MIR164c precursor miRNA

Gene family

MIPF0000045; MIR164

Sequence

ggagagaggguaagccaugcUGGAGAAGCAGGGCACAUGCUaaagcaaucagacaaaaaucugagaaauuuugcaugugcccuggcucuccagcuuggaccgucucccuuac
((.((((.(((...(((.((((((((..((((((((((((.(((....(((((......)))))....))).))))))))))))..)))))))).)))))).))))))....

Structure

----  a    g   aag   u        AG            U   gcaa     ca 
    gg gaga ggu   cca gcUGGAGA  CAGGGCACAUGC aaa    ucaga  a
    || |||| |||   ||| ||||||||  |||||||||||| |||    |||||   
    cc cucu cca   ggu cgaccucu  gucccguguacg uuu    agucu  a
cauu  -    g   ---   u        cg            u   aaag     aa 

Annotation confidence Not enough data

Genome context

Unknown

Mature tcc-miR164c

• Accession: MIMAT0020382
• Description: Theobroma cacao tcc-miR164c mature miRNA
• Sequence: 21 - UGGAGAAGCAGGGCACAUGCU - 41
• Evidence: not_experimental

References

1. PubMed ID: 21186351
   The genome of Theobroma cacao
   "Argout X, Salse J, Aury JM, Guiltinan MJ, Droc G, Gouzy J, Allegre M, Chaparro C, Legavre T, Maximova SN, Abrouk M, Murat F, Fouet O, Poulain J, Ruiz M, Roguet Y, Rodier-Goud M, Barbosa-Neto JF, Sabot F, Kudrna D, Ammiraju JS, Schuster SC, Carlson JE, Sal"
   "Nat Genet (2011) 43:101-108