Stem-loop tcc-MIR171f

Accession

MI0017494

Description

Theobroma cacao tcc-MIR171f precursor miRNA

Gene family

MIPF0000030; MIR171_1

Sequence

gcacaaagagaaaacggggauguuggaauggcucaaucaaaucaaaucucccaagcuuuuuauggguguuuuaauuUGAUUGAGCCGUGCCAAUAUCacguuaauuacuuaucuuca
............((((..((((((((.(((((((((((((((.(((.(.((((.........)))).).))).))))))))))))))).)))))))).))))...............

Structure

---gcacaaagagaa    gg        a               c   u u    agc 
               aacg  gauguugg auggcucaaucaaau aaa c ccca   u
               ||||  |||||||| ||||||||||||||| ||| | ||||   u
               uugc  CUAUAACC UGCCGAGUUAGUuua uuu g gggu   u
acuucuauucauuaa    -a        G               a   u u    auu 

Annotation confidence Not enough data

Genome context

Unknown

Mature tcc-miR171f

• Accession: MIMAT0020410
• Description: Theobroma cacao tcc-miR171f mature miRNA
• Sequence: 77 - UGAUUGAGCCGUGCCAAUAUC - 97
• Evidence: not_experimental

References

1. PubMed ID: 21186351
   The genome of Theobroma cacao
   "Argout X, Salse J, Aury JM, Guiltinan MJ, Droc G, Gouzy J, Allegre M, Chaparro C, Legavre T, Maximova SN, Abrouk M, Murat F, Fouet O, Poulain J, Ruiz M, Roguet Y, Rodier-Goud M, Barbosa-Neto JF, Sabot F, Kudrna D, Ammiraju JS, Schuster SC, Carlson JE, Sal"
   "Nat Genet (2011) 43:101-108