Stem-loop tcc-MIR395b

Accession

MI0017510

Description

Theobroma cacao tcc-MIR395b precursor miRNA

Gene family

MIPF0000016; MIR395

Sequence

uaugccaggugcccacuagaguuccccugggcacuucaguugauuucuuuagagcucaaaaccucuuaccugucuaCUGAAGUGUUUGGGGGAACUCcgguugccaucugagacagu
.....((((((.(.(((.((((((((((((((((((((((.(((......((((........)))).....))).)))))))))))))))))))))).))).).)))))).......

Structure

--uaugc      c c   a                      u   uucuuu    cuc 
       caggug c acu gaguuccccugggcacuucagu gau      agag   a
       |||||| | ||| |||||||||||||||||||||| |||      ||||    
       gucuac g ugg CUCAAGGGGGUUUGUGAAGUCa cug      ucuc   a
ugacaga      c u   c                      u   -uccau    caa 

Annotation confidence Not enough data

Genome context

Unknown

Mature tcc-miR395b

• Accession: MIMAT0020426
• Description: Theobroma cacao tcc-miR395b mature miRNA
• Sequence: 77 - CUGAAGUGUUUGGGGGAACUC - 97
• Evidence: not_experimental

References

1. PubMed ID: 21186351
   The genome of Theobroma cacao
   "Argout X, Salse J, Aury JM, Guiltinan MJ, Droc G, Gouzy J, Allegre M, Chaparro C, Legavre T, Maximova SN, Abrouk M, Murat F, Fouet O, Poulain J, Ruiz M, Roguet Y, Rodier-Goud M, Barbosa-Neto JF, Sabot F, Kudrna D, Ammiraju JS, Schuster SC, Carlson JE, Sal"
   "Nat Genet (2011) 43:101-108