Stem-loop sequence tcc-MIR398b

Accession MI0017518
Description Theobroma cacao miR398b stem-loop
Gene family MIPF0000107; MIR398
Stem-loop 
ca  -c      -uu    a          cc    a     c   g    uuggccugagcuaggccuuugccaagcugcuau 
  gc  agaugg   uacc cgaaggggug  accu agaac cag cggu                                 g
  ||  ||||||   |||| ||||||||||  |||| ||||| ||| ||||                                 a
  cg  ucuauc   augg gcuuccccac  ugga ucuug guu gcca                                 a
--  cu      uuc    c          --    c     u   g    acgacgaccgacguaaucguaagucggaaggaa
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Mature sequence tcc-miR398b

Accession MIMAT0020434
Sequence

125 -  

uguguucucaggucaccccuu

 - 145

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Evidence not experimental

References

1
PMID:21186351 "The genome of Theobroma cacao" Argout X, Salse J, Aury JM, Guiltinan MJ, Droc G, Gouzy J, Allegre M, Chaparro C, Legavre T, Maximova SN, Abrouk M, Murat F, Fouet O, Poulain J, Ruiz M, Roguet Y, Rodier-Goud M, Barbosa-Neto JF, Sabot F, Kudrna D, Ammiraju JS, Schuster SC, Carlson JE, Sal Nat Genet. 43:101-108(2011).