Stem-loop tcc-MIR399h

Accession

MI0017526

Description

Theobroma cacao tcc-MIR399h precursor miRNA

Gene family

MIPF0000015; MIR399

Sequence

aaagaugcauggaugcauuacagggcaaaucuccuuuggaagucagcugaacucgaggcaugggagauaagcucacUGCCAAAGGAGAUUUGCCCCGcaauucagccaugcuaaacc
......((((((.((.(((.(.(((((((((((((((((.(((.((((...(((.........)))...)))).))).))))))))))))))))).).))).)).))))))......

Structure

aaagau      a  c   a a                 a   c    gaa   gag 
      gcaugg ug auu c gggcaaaucuccuuugg agu agcu   cuc   g
      |||||| || ||| | ||||||||||||||||| ||| ||||   |||   c
      cguacc ac uaa G CCCGUUUAGAGGAAACC Uca ucga   gag   a
ccaaau      g  u   c C                 G   c    aua   ggu 

Annotation confidence Not enough data

Genome context

Unknown

Mature tcc-miR399h

• Accession: MIMAT0020442
• Description: Theobroma cacao tcc-miR399h mature miRNA
• Sequence: 77 - UGCCAAAGGAGAUUUGCCCCG - 97
• Evidence: not_experimental

References

1. PubMed ID: 21186351
   The genome of Theobroma cacao
   "Argout X, Salse J, Aury JM, Guiltinan MJ, Droc G, Gouzy J, Allegre M, Chaparro C, Legavre T, Maximova SN, Abrouk M, Murat F, Fouet O, Poulain J, Ruiz M, Roguet Y, Rodier-Goud M, Barbosa-Neto JF, Sabot F, Kudrna D, Ammiraju JS, Schuster SC, Carlson JE, Sal"
   "Nat Genet (2011) 43:101-108