Stem-loop tcc-MIR403a

Accession

MI0017528

Description

Theobroma cacao tcc-MIR403a precursor miRNA

Gene family

MIPF0000290; MIR403

Sequence

aaaggaggaggcagauuucagguuugugcgugaauuuaauaaaaccguaagccacaaaaaucuggaagguggauuuaguuucaugUUAGAUUCACGCACAAACUCGuaaucugucuuuucauucuu
....(((((((((((((.(.(((((((((((((((((((((((((..((((((((.............)))).))))))))..))))))))))))))))))))).).)))))))))))))......

Structure

--aaag             u a                     --    cg    -    aaaaa 
      gaggaggcagauu c gguuugugcgugaauuuaaua  aaac  uaag ccac     u
      ||||||||||||| | |||||||||||||||||||||  ||||  |||| ||||     c
      cuuuucugucuaa G UCAAACACGCACUUAGAUUgu  uuug  auuu ggug     u
uucuua             u C                     ac    --    a    gaagg 

Annotation confidence Not enough data

Genome context

Unknown

Mature tcc-miR403a

• Accession: MIMAT0020444
• Description: Theobroma cacao tcc-miR403a mature miRNA
• Sequence: 86 - UUAGAUUCACGCACAAACUCG - 106
• Evidence: not_experimental

References

1. PubMed ID: 21186351
   The genome of Theobroma cacao
   "Argout X, Salse J, Aury JM, Guiltinan MJ, Droc G, Gouzy J, Allegre M, Chaparro C, Legavre T, Maximova SN, Abrouk M, Murat F, Fouet O, Poulain J, Ruiz M, Roguet Y, Rodier-Goud M, Barbosa-Neto JF, Sabot F, Kudrna D, Ammiraju JS, Schuster SC, Carlson JE, Sal"
   "Nat Genet (2011) 43:101-108