miRBase entry: tcc-MIR403b

Stem-loop tcc-MIR403b


Accession
MI0017529
Description
Theobroma cacao tcc-MIR403b precursor miRNA
Gene family
MIPF0000290; MIR403


Sequence

aguagaugggacacaucuccaguuugugccuggaucagacgccaucaaggccgucaauuuuucaaucaugccaucgauggugUUAGAUUCACGCACAAACUCGugaucugucuccucuuggaa
...(((.((((((.(((.(.(((((((((.((((((.(((((((((..(((..................)))...))))))))).)))))).))))))))).).))).)))))).))).....

Structure
--agu   u      c   u c         c      a         -aa   cgucaauu 
     aga gggaca auc c aguuugugc uggauc gacgccauc   ggc        u
     ||| |||||| ||| | ||||||||| |||||| |||||||||   |||         
     ucu cucugu uag G UCAAACACG ACUUAG UUgugguag   ccg        u
aaggu   c      c   u C         C      A         cua   uacuaacu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature tcc-miR403b

Accession MIMAT0020445
Description Theobroma cacao tcc-miR403b mature miRNA
Sequence 83 - UUAGAUUCACGCACAAACUCG - 103
Evidence not_experimental

References

  1. PubMed ID: 21186351
    The genome of Theobroma cacao
    "Argout X, Salse J, Aury JM, Guiltinan MJ, Droc G, Gouzy J, Allegre M, Chaparro C, Legavre T, Maximova SN, Abrouk M, Murat F, Fouet O, Poulain J, Ruiz M, Roguet Y, Rodier-Goud M, Barbosa-Neto JF, Sabot F, Kudrna D, Ammiraju JS, Schuster SC, Carlson JE, Sal"
    "Nat Genet (2011) 43:101-108