Stem-loop tcc-MIR2111

Accession

MI0017534

Description

Theobroma cacao tcc-MIR2111 precursor miRNA

Gene family

MIPF0000754; MIR2111

Sequence

aaauauugguaaggaccgggUAAUCUGCAUCCUGAGGUUUAgaucuacauguaauacuuguugcaucuagcccucgggagugcagauuaccucuuccucacuggcaauaca
...(((((.((((((..((((((((((((((((((((.(((((((.(((.((...)).))).).)))))).)))))))).))))))))))))..))))...)).)))))..

Structure

aaa     g  ---    cc            -        U      - u   u  a 
   uauug ua   agga  gggUAAUCUGCA UCCUGAGG UUAgau c aca gu  
   ||||| ||   ||||  |||||||||||| |||||||| |||||| | ||| || a
   auaac gu   uccu  uccauuagacgu agggcucc gaucua g ugu ca  
-ac     g  cac    uc            g        c      c u   u  u 

Annotation confidence Not enough data

Genome context

Unknown

Mature tcc-miR2111

• Accession: MIMAT0020450
• Description: Theobroma cacao tcc-miR2111 mature miRNA
• Sequence: 21 - UAAUCUGCAUCCUGAGGUUUA - 41
• Evidence: not_experimental

References

1. PubMed ID: 21186351
   The genome of Theobroma cacao
   "Argout X, Salse J, Aury JM, Guiltinan MJ, Droc G, Gouzy J, Allegre M, Chaparro C, Legavre T, Maximova SN, Abrouk M, Murat F, Fouet O, Poulain J, Ruiz M, Roguet Y, Rodier-Goud M, Barbosa-Neto JF, Sabot F, Kudrna D, Ammiraju JS, Schuster SC, Carlson JE, Sal"
   "Nat Genet (2011) 43:101-108