miRBase entry: cel-mir-4806

Stem-loop cel-mir-4806


Accession
MI0017536
Description
Caenorhabditis elegans cel-mir-4806 precursor miRNA


Sequence

50 reads, 7 reads per million, 11 experiments
ggauucaguggcgagcCACUUACCGGCUGAGCCAUGCgcgcugcgcugcAUAGCUCAGCCGGUAAGAGGCuugccuuuggagc
...(((((.((((((((.((((((((((((((.(((((((...))).)))).)))))))))))))).)))))))).)))))..

Structure
gga     u        A              C    -   c 
   uucag ggcgagcC CUUACCGGCUGAGC AUGC gcg  
   ||||| |||||||| |||||||||||||| |||| ||| u
   agguu ccguuCGG GAAUGGCCGACUCG UAcg cgc  
-cg     u        A              A    u   g 


Annotation confidence Not enough data
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Genome context
chrII: 12346299-12346381 [-]

Database links

Mature cel-miR-4806-5p

Accession MIMAT0019988
Description Caenorhabditis elegans cel-miR-4806-5p mature miRNA
Sequence 17 - CACUUACCGGCUGAGCCAUGC - 37
Evidence experimental
Illumina [1]
Database links

Mature cel-miR-4806-3p

Accession MIMAT0019989
Description Caenorhabditis elegans cel-miR-4806-3p mature miRNA
Sequence 50 - AUAGCUCAGCCGGUAAGAGGC - 70
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21085120
    Formation, regulation and evolution of Caenorhabditis elegans 3'UTRs
    "Jan CH, Friedman RC, Ruby JG, Bartel DP"
    "Nature (2011) 469:97-101