miRBase entry: cel-mir-4807

Stem-loop cel-mir-4807


Accession
MI0017537
Description
Caenorhabditis elegans cel-mir-4807 precursor miRNA


Sequence

515 reads, 9 reads per million, 14 experiments
gugaguucaaaguuacauuuucaauauaucuauuuugaAAAUGCGACUUCUGGGCUUACAG
((((((((((((((.(((((((((..........))))))))).))))).)))))))))..

Structure
--         -     a         uaua 
  gugaguuca aaguu cauuuucaa    u
  ||||||||| ||||| |||||||||     
  CAUUCGGGU UUCAG GUAAAaguu    c
GA         C     C         uuau 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chrX: 1872466-1872526 [+]
Clustered miRNAs
10 other miRNAs are < 10 kb from cel-mir-4807
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cel-miR-4807

Accession MIMAT0019990
Description Caenorhabditis elegans cel-miR-4807 mature miRNA
Sequence 39 - AAAUGCGACUUCUGGGCUUACAG - 61
Evidence experimental
Illumina [1]
Database links

References

  1. PubMed ID: 21085120
    Formation, regulation and evolution of Caenorhabditis elegans 3'UTRs
    "Jan CH, Friedman RC, Ruby JG, Bartel DP"
    "Nature (2011) 469:97-101