Stem-loop sko-mir-4820

Accession

MI0017557

Description

Saccoglossus kowalevskii sko-mir-4820 precursor miRNA

Sequence

ucauaacugagaccauaccuauggcuacagcacgguuguaucaaugcugcuaacugugauUGAGCUUCCUUGCUGUAGACAUggguaggccuuccacaac
........(((.((.((((((((.((((((((.((..((.(((((((........)).)))))))..)).)))))))).)))))))))).))).......

Structure

ucauaacu   a  a        g        c  uu  a     -  ugc 
        gag cc uaccuaug cuacagca gg  gu ucaau gc   u
        ||| || |||||||| |||||||| ||  || ||||| ||    
        uuc gg augggUAC GAUGUCGU CC  CG AGUua ug   a
-caacacc   c  -        A        U  UU  -     g  uca 

Annotation confidence Not enough data

Genome context

GL013470.1: 533417-533516 [+]

Mature sko-miR-4820

• Accession: MIMAT0020021
• Description: Saccoglossus kowalevskii sko-miR-4820 mature miRNA
• Sequence: 61 - UGAGCUUCCUUGCUGUAGACAU - 82
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 21210939
   microRNA complements in deuterostomes: origin and evolution of microRNAs
   "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
   "Evol Dev (2011) 13:15-27