miRBase entry: sko-mir-4823

Stem-loop sko-mir-4823


Accession
MI0017561
Description
Saccoglossus kowalevskii sko-mir-4823 precursor miRNA


Sequence

uuucuuacaucgacuUGAGUAGACAAUCAACUGACCGuagcgggcgcuaaauuguuuucgACCAGUUUGUUGUCUAUUCGAgcccguguauguauauucu
.....(((((.(.((((((((((((((.(((((..((.(((((........)))))..))..))))).)))))))))))))).).)))))..........

Structure
-----uuucu     c a              C     AC  -u     gcg 
          uacau g cuUGAGUAGACAAU AACUG  CG  agcgg   c
          ||||| | |||||||||||||| |||||  ||  |||||    
          augug c gAGCUUAUCUGUUG UUGAC  gc  uuguu   u
ucuuauaugu     c c              U     CA  uu     aaa 


Annotation confidence Not enough data
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Genome context
GL011189.1: 122830-122929 [-]

Database links

Mature sko-miR-4823-5p

Accession MIMAT0020027
Description Saccoglossus kowalevskii sko-miR-4823-5p mature miRNA
Sequence 16 - UGAGUAGACAAUCAACUGACCG - 37
Evidence experimental
454 [1]

Mature sko-miR-4823-3p

Accession MIMAT0020028
Description Saccoglossus kowalevskii sko-miR-4823-3p mature miRNA
Sequence 61 - ACCAGUUUGUUGUCUAUUCGA - 81
Evidence experimental
454 [1]

References

  1. PubMed ID: 21210939
    microRNA complements in deuterostomes: origin and evolution of microRNAs
    "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
    "Evol Dev (2011) 13:15-27