miRBase entry: sko-mir-4827b

Stem-loop sko-mir-4827b


Accession
MI0017566
Description
Saccoglossus kowalevskii sko-mir-4827b precursor miRNA


Sequence

uaacgcauguguggAAGUGUAUAAUCGGGCAUAUAGUaagauguuccuguaugcccuauuaauacauuccauaaggcgcca
...(((...(((((((.((((((((.((((((((((.((....)).)))))))))).))).))))))))))))..)))...

Structure
uaa   aug       G     -   C          U  g 
   cgc   uguggAA UGUAU AAU GGGCAUAUAG aa a
   |||   ||||||| ||||| ||| |||||||||| ||  
   gcg   auaccuu acaua uua cccguauguc uu u
acc   -ga       -     a   u          c  g 


Annotation confidence Not enough data
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Genome context
GL015512.1: 107183-107263 [+]

Database links

Mature sko-miR-4827b

Accession MIMAT0020035
Description Saccoglossus kowalevskii sko-miR-4827b mature miRNA
Sequence 15 - AAGUGUAUAAUCGGGCAUAUAGU - 37
Evidence experimental
454 [1]

References

  1. PubMed ID: 21210939
    microRNA complements in deuterostomes: origin and evolution of microRNAs
    "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
    "Evol Dev (2011) 13:15-27