Stem-loop sko-mir-4828b

Accession

MI0017568

Description

Saccoglossus kowalevskii sko-mir-4828b precursor miRNA

Sequence

auuguguggacugacucuggccggccagccuaaauggcacuuuacacugcauacauucacagcAGUAAAUGCCAUUCAGGUUGACuggaaagugucuucaaac
......((((..(((.((..((((.((((((.(((((((.(((..(((((...........))))))))))))))).)))))).))))..)).)))))))...

Structure

auugug    cu   u  gg    c      a       c   ac     auac 
      ugga  gac cu  ccgg cagccu aauggca uuu  acugc    a
      ||||  ||| ||  |||| |||||| ||||||| |||  |||||    u
      acuu  cug ga  gguC GUUGGA UUACCGU AAA  UGAcg    u
---caa    --   u  aa    A      C       -   --     acac 

Annotation confidence Not enough data

Genome context

GL013274.1: 368571-368673 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from sko-mir-4828b

Mature sko-miR-4828b

• Accession: MIMAT0020037
• Description: Saccoglossus kowalevskii sko-miR-4828b mature miRNA
• Sequence: 64 - AGUAAAUGCCAUUCAGGUUGAC - 85
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 21210939
   microRNA complements in deuterostomes: origin and evolution of microRNAs
   "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
   "Evol Dev (2011) 13:15-27