miRBase entry: sko-mir-4829b

Stem-loop sko-mir-4829b


Accession
MI0017570
Description
Saccoglossus kowalevskii sko-mir-4829b precursor miRNA


Sequence

uacuuuauuguagggggugagccagacauuuggaaaagcacauuuugacacaggcaauaaUGUACUCUUCCCAAUGCCUGGGucaaucuuugcacuuaauc
........((((((((.(((.((((.((((.((((.((.((((((((.(....)))).))))).)).)))).)))).)))).))).)))))))).......

Structure
uacuuuau        g   g    a    u    a  c     -   a a 
        uguagggg uga ccag cauu ggaa ag acauu uug c c
        |||||||| ||| |||| |||| |||| || ||||| ||| |  
        acguuucu acu GGUC GUAA CCUU UC UGUaa aac g a
-cuaauuc        a   G    C    C    C  A     u   - g 


Annotation confidence Not enough data
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Genome context
GL010720.1: 415918-416018 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from sko-mir-4829b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature sko-miR-4829b

Accession MIMAT0020039
Description Saccoglossus kowalevskii sko-miR-4829b mature miRNA
Sequence 61 - UGUACUCUUCCCAAUGCCUGGG - 82
Evidence experimental
454 [1]

References

  1. PubMed ID: 21210939
    microRNA complements in deuterostomes: origin and evolution of microRNAs
    "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
    "Evol Dev (2011) 13:15-27