miRBase entry: sko-mir-4829c

Stem-loop sko-mir-4829c


Accession
MI0017571
Description
Saccoglossus kowalevskii sko-mir-4829c precursor miRNA


Sequence

gguggccuagggagcugguucagguauugguaaaagcacauugaaugcuaauuaacaaaaUGUACUUUUCCCAAUGCCGGGGcugcguucccgacgucgc
.(((((...((((((((((((.((((((((.(((((.(((((................))))).))))).)))))))).)))))).))))))...)))))

Structure
g     cua      -      a        u     c     gaaugcu 
 guggc   gggagc ugguuc gguauugg aaaag acauu       a
 |||||   |||||| |||||| |||||||| ||||| |||||        
 cgcug   cccuug gucGGG CCGUAACC UUUUC UGUaa       a
-     cag      c      G        C     A     aacaauu 


Annotation confidence Not enough data
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Genome context
GL010720.1: 415462-415561 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from sko-mir-4829c
Name Accession Chromosome Start End Strand Confidence




Database links

Mature sko-miR-4829c

Accession MIMAT0020040
Description Saccoglossus kowalevskii sko-miR-4829c mature miRNA
Sequence 61 - UGUACUUUUCCCAAUGCCGGGG - 82
Evidence experimental
454 [1]

References

  1. PubMed ID: 21210939
    microRNA complements in deuterostomes: origin and evolution of microRNAs
    "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
    "Evol Dev (2011) 13:15-27